NEIBank Publications
NEIBank Publications*

* Since these papers were submitted, more sequences have been added to the collections for RPE/choroid (cs), normalized lens (fs) and retina (hd/he). In addition we continue to reanalyze and update all the datasets as more information becomes available from GenBank and other resources. As a result, listings of clones on the web site may differ in relative ranking from those described in the publications. Gene names, particularly those derived from UniGene, may also be updated.

A summary of all current NEIBank libraries can be viewed at the Library Summary Page.


2011


Serial analysis of gene expression (SAGE) in normal human trabecular meshwork
 Yutao Liu, Drew Munro, David Layfield, Andrew Dellinger, Jeffrey Walter, Katherine Peterson, Catherine Bowes Rickman,
R. Rand Allingham, Michael A. Hauser Mol. Vis. 2011; 17:885-893. View Article

2010


Temporal ChIP-on-Chip of RNA-Polymerase-II to detect novel gene activation events during photoreceptor maturation
 P. Tummala, R.S. Mali, E. Guzman, X. Zhang, K.P. Mitton Mol. Vis. 2010; 16:252-271. View Article

2009


Expression analysis of human pterygium shows a predominance of conjunctival and limbal markers and genes associated
with cell migration C.J. Jaworski, M. Aryankalayil-John, M.M. Campos, R.N. Fariss, J. Rowsey, N. Agarwalla, T.W. Reid,
N. Dushku, C.A. Cox, D. Carper, G. Wistow Mol. Vis. 2009; 15: 2421-2434. View Article

Expressed sequence tag analysis of adult human optic nerve for NEIBank: identification of cell type and tissue markers.
Bernstein SL, Guo Y, Peterson K, Wistow G. BMC Neurosci. 2009 Sep 24;10:121.View Article

2008


Expressed sequence tag analysis of guinea pig (Cavia porcellus) eye tissues for NEIBank. Simpanya MF, Wistow G, Gao J,
David LL, Giblin FJ, Mitton KP. Mol. Vis. 2008; 14:2413-2427. View Article

NEIBank: Genomics and bioinformatics resources for vision research. Graeme Wistow, Katherine Peterson, James Gao,
Patee Buchoff, Cynthia Jaworski, Catherine Bowes-Rickman, Jessica N. Ebright, Michael A. Hauser, David Hoover. Mol. Vis. 2008;
14:1327-1337.View Article

2007


Endogenous retroviral insertion in Cryge in the mouse No3 cataract mutant. Nabanita Nag, Katherine Peterson, Keith Wyatt,
Sonja Hess, Sugata Ray, Jack Favor, Debora Bogani, Mary Lyon, Graeme Wistow. Genomics 2007; 89(4):512-520.View Article

Development of a microarray chip for gene expression in rabbit ocular research. Michael P. Popp, Li Liu, Adrian Timmers,
Douglas W. Esson, Lineu Shiroma, Craig Meyers, Scott Berceli, Ming Tao, Graeme Wistow, Gregory S. Schultz, Mark B. Sherwood.
Mol. Vis. 2007; 13:164-173.View Article

2005


The NEIBank Project for Ocular Genomics: Data-mining Gene Expression in Human and Rodent Eye Tissues.
Wistow, G. Prog Retin Eye Res. 2005 View Article

gammaN-crystallin and the evolution of the betagamma-crystallin superfamily in vertebrates.Wistow G, Wyatt K, David L,
Gao C, Bateman O, Bernstein S, Tomarev S, Segovia L, Slingsby C, Vihtelic T. FEBS J.. 2005; 272(9):2276-91.

Gene Expression Profile Studies of Human Keratoconus Cornea for NEIBank: A Novel Cornea-Expressed Gene and
the Absence of Transcripts for Aquaporin 5. Rabinowitz Y.S., Wistow G. Invest Ophthalmol Vis Sci. 2005 Apr; 46(4):1239-46.
View Article

The Lacrimal Gland Transcriptome is an Unusually Rich Source of Rare and Poorly Characterized Gene Transcripts.
Ozyildirim A.M., Wistow G.J., Gao J., Wang J., Dickinson D.P., Frierson H.F. Jr, Laurie G.W. Invest Ophthalmol Vis Sci. 2005 May;
46(5):1572-80.View Article

2004


EST Analysis of Mouse Retina and RPE/Choroid cDNA Libraries.Ida H, Boylan SA, Weigel AL, Smit-McBride Z, Chao A, Gao J, Buchoff P,
Wistow G, Hjelmeland LM. Mol Vis. 2004; 10:439:44. View Article

Gene Expression Profile of the Rat Eye Iridocorneal Angle: NEIBank Expressed Sequence Tag Analysis. Ahmed F.,
Torrado M., Zinovieva R.D., Senatorov V.V., Wistow G., Tomarev S.I. Invest Ophthalmol Vis Sci. 2004; 45(9):3081-90. View Article

Postnatal gene expression in the normal mouse cornea by SAGE. Norman B, Davis J, Piatigorsky J. Invest Ophthalmol Vis
Sci. 2004; 45(2):429-40. View Article

2003


Gene Expression Profile Of The Human Trabecular Meshwork: NEIBank Sequence Tag Analysis. Stanislav I. Tomarev,
Graeme Wistow, Vincent Raymond, Stephane Dubois, Irina Malyukova. Ophthalmol Vis Sci 2003; 44:2588-2596. View Article

2002


A Project For Ocular Bioinformatics: NEIBank. Mol Vis 2002; 8:161-163. Graeme Wistow. View Article

Grouping And Identification Of Sequence Tags (GRIST): Bioinformatics Tools For The NEIBank Database.
Graeme Wistow, Steven L. Bernstein, Jeffrey W. Touchman, Gerard Bouffard, M. Keith Wyatt, Katherine Peterson,
Amita Behal, James Gao, Patee Buchoff, Don Smith. Mol Vis 2002; 8:164-170. View Article

Expressed Sequence Tag Analysis Of Adult Human Lens For The NEIBank Project: Over 2000 Non-Redundant Transcripts,
Novel Genes And Splice Variants. Graeme Wistow, Steven L. Bernstein, M. Keith Wyatt, Amita Behal, Jeffrey W. Touchman,
Gerard Bouffard, Don Smith, Katherine Peterson. Mol Vis 2002; 8:171-184.View Article

Expressed Sequence Tag Analysis Of Adult Human Iris For The NEIBank Project: Steroid-Response Factors And
Similarities With Retinal Pigment Epithelium. Graeme Wistow, Steven L. Bernstein, Sugata Ray, M. Keith Wyatt,
Amita Behal, Jeffrey W. Touchman, Gerard Bouffard, Don Smith, Katherine Peterson. Mol Vis 2002; 8:185-195.
View Article

Expressed Sequence Tag Analysis Of Human Retina For The NEIBank Project: Retbindin, An Abundant, Novel Retinal
cDNA And Alternative Splicing Of Other Retina-Preferred Gene Transcripts. Graeme Wistow, Steven L. Bernstein,
M. Keith Wyatt, Sugata Ray, Amita Behal, Jeffrey W. Touchman, Gerard Bouffard, Don Smith, Katherine Peterson.
Mol Vis 2002; 8:196-204. View Article

Expressed Sequence Tag Analysis Of Human RPE/Choroid For The NEIBank Project: Over 6000 Non-Redundant Transcripts,
Novel Genes And Splice Variants. Graeme Wistow, Steven L. Bernstein, M. Keith Wyatt, Robert N. Farris, Amita
Behal, Jeffrey W. Touchman, Gerard Bouffard, Don Smith, Katherine Peterson. Mol Vis 2002; 8:205-220. View Article

2000


Characterization of gene expression in human trabecular meshwork using single-pass sequencing of 1060 clones. Gonzalez P,
Epstein DL,Borras T. Invest Ophthalmol Vis Sci. 2000; 41(12): 3678-93. View Article

1995


Isolation and characterization of cell-specific cDNA clones from a subtractive library of the ocular ciliary body of a single
normal human donor: transcription and synthesis of plasma proteins. Escribano J, Ortego J, Coca-Prados M. J Biochem (Tokyo).
1995; 118(5):921-31.

Book
Molecular Biology and Evolution of Crystallins: Gene Recruitment and Multifunctional Proteins in the Eye
Lens. Graeme Wistow, Springer and R.G. Landes Company, Austin TX 1995.
ISBN 1-57059-299-3
View MBEC Full Version (PDF)
View MBEC Introduction and Chapter 1 (PDF)
View MBEC Chapter 2 (PDF)
View MBEC Chapter 3 (PDF)
View MBEC Chapter 4 (PDF)
View MBEC Chapter 5 (PDF)
View MBEC Chapter 6 and Index (PDF)